WormMine: Gene WBGene00039741

• WormBase Gene ID: WBGene00039741
• Gene Name: CBG20827
• Sequence Name: CBG20827
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to be part of acetylcholine-gated channel complex. Is an ortholog of C. elegans F01D5.6.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG20827.1	CBG20827.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG20827	CBG20827		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-htz-1(gu167) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-htz-1(gu167)_downregulated

2 Expression Patterns

• Primary Identifier: Expr1059151
• Remark: CBG20827, TTTCCCTGAAACTGATTTCTGACTCAAGGTACAACAAGATCGAAGAAGAAACCGAGGCCA, WBGene00039741
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1058639
• Remark: CBG20828, ATTGTTGTCATGGGGTACAGTATTGGGACGACAGCAGCCGTCGATTTGGCATCAAGTAAC, WBGene00039742
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

1 GO Annotation

0 Homologues

0 Locations

1 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region