WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039779 Gene Name  Cbr-gcy-29
Sequence Name  ? CBG20868 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process and intracellular signal transduction. Is an ortholog of C. elegans gcy-29. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20868.1 CBG20868.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20868 CBG20868   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00029882
WBVar00029852
WBVar00029887
WBVar00029857
WBVar00029892
WBVar00029862
WBVar00029897
WBVar00029867
WBVar00029902
WBVar00029872
WBVar00029842
WBVar00029907
WBVar00029877
WBVar00029847
WBVar00029912

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-gcy-29, CAGAAATGGCAAGCACAATCGATTCTCCGTCGTCAACAATCTGATATCTACGCTTTTGGA, WBGene00039779   Expr1052791 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region