WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040015 Gene Name  Cbr-prx-10
Sequence Name  ? CBG21169 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and tryptophan-tRNA ligase activity. Predicted to be involved in tryptophanyl-tRNA aminoacylation. Is an ortholog of C. elegans prx-10. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21169.1 CBG21169.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21169 CBG21169   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00129439
WBVar00129438
WBVar00129441
WBVar00129440
WBVar00129442
WBVar00129435
WBVar00129437
WBVar00129436

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-wars-2, CGACGTTTTGACATTCAAAGCGACTACAGTACCCGTCGGCGAAGATCAAAGCCAACATTT, WBGene00040015   Expr1061913 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  enables
  enables

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region