WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040056 Gene Name  Cbr-nas-1
Sequence Name  ? CBG21213 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans nas-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21213.1 CBG21213.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21213 CBG21213   [unknown]

0 RNAi Result

17 Allele

Public Name
WBVar00129567
WBVar00129566
WBVar00129569
WBVar00129568
WBVar00129571
WBVar00129570
WBVar00129573
WBVar00129572
WBVar00129574
WBVar00129559
WBVar00129558
WBVar00129561
WBVar00129560
WBVar00129563
WBVar00129562
WBVar00129565
WBVar00129564

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-nas-1, AATAATCATTTCACTTCAATTATGGGAAAAGCCAACGACTTCTCCACATCCGACCTTCGT, WBGene00040056   Expr1060519 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region