WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040152 Gene Name  Cbr-coa-6
Sequence Name  ? CBG21348 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in respiratory chain complex IV assembly. Predicted to be located in mitochondrion. Predicted to be part of respiratory chain complex IV. Is an ortholog of C. elegans coa-6. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21348.1 CBG21348.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21348 CBG21348   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00015629

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-aph-2, CATATTTTTTTCGTTTTTCAACGGCGAATCTTTGGATTATATTGGAAGCGGTACCACTGC, WBGene00040151   Expr1063432 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG21348, TCAACGATCGGTGGCACATTCCAGTCTTAAACTTCGAAGGTAGTTCAGAGAATATGAGGA, WBGene00040152   Expr1066352 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region