WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040153 Gene Name  CBG21349
Sequence Name  ? CBG21349 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metallocarboxypeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans ZC434.9. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21349c.1 CBG21349c.1   [unknown]
Transcript:CBG21349b.1 CBG21349b.1   [unknown]
Transcript:CBG21349a.1 CBG21349a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21349b CBG21349b   [unknown]
CDS:CBG21349a CBG21349a   [unknown]
CDS:CBG21349c CBG21349c   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00129824

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG21349, AAGTCTGTCAGATTTCTGCCATCTACATGAGACAAGACTGTGCAAGAACTTGTAGATTCT, WBGene00040153   Expr1061470 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region