WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040545 Gene Name  Cbr-figl-1
Sequence Name  ? CBG21866 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans figl-1. In C. elegans, figl-1 is involved in ATP metabolic process and positive regulation of mitotic cell cycle. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21866c.1 CBG21866c.1   [unknown]
Transcript:CBG21866b.1 CBG21866b.1   [unknown]
Transcript:CBG21866b.2 CBG21866b.2   [unknown]
Transcript:CBG21866a.1 CBG21866a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21866c CBG21866c   [unknown]
CDS:CBG21866b CBG21866b   [unknown]
CDS:CBG21866a CBG21866a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-figl-1, AATATTATCTCGTTGATCGAGTCGGAAATCATGTCGGTGAATAATCAAATCGGATGGGCT, WBGene00040545   Expr1057318 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region