WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040725 Gene Name  Cbr-ints-1
Sequence Name  ? CBG22096 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in U2 snRNA 3'-end processing. Predicted to be part of integrator complex. Is an ortholog of C. elegans ints-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22096.1 CBG22096.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22096 CBG22096   [unknown]

0 RNAi Result

25 Allele

Public Name
WBVar00131072
WBVar00131073
WBVar00131070
WBVar00131071
WBVar00131076
WBVar00131077
WBVar00131074
WBVar00131075
WBVar00131080
WBVar00131081
WBVar00131078
WBVar00131079
WBVar00131084
WBVar00131085
WBVar00131082
WBVar00131083
WBVar00033377
WBVar00033382
WBVar00131063
WBVar00131065
WBVar00131064
WBVar00131067
WBVar00131066
WBVar00131069
WBVar00131068

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG22096, GAAGGAGCAGACGGCGTTCGCCGAGTTGACCATCAAAGCGTGTGCTGAGTATTTGAATCA, WBGene00040725   Expr1058790 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  part_of

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region