WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041249 Gene Name  Cbr-ced-8
Sequence Name  ? CBG22761 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans ced-8. In C. elegans, ced-8 is involved in apoptotic process; embryo development; and engulfment of apoptotic cell. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22761.1 CBG22761.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22761 CBG22761   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00007674
WBVar00007709
WBVar00007694
WBVar00007679
WBVar00007664
WBVar00007714
WBVar00007699
WBVar00007684
WBVar00007669
WBVar00007704
WBVar00007689

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ced-8, TTCATCATGCTGATCTACTACAAATTCTTCCACCCAAATCGAAGGCAAGATTTGGAAGCG, WBGene00041249   Expr1062600 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region