WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041648 Gene Name  Cbr-pyc-1
Sequence Name  ? CBG23262 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and pyruvate carboxylase activity. Predicted to be involved in gluconeogenesis and pyruvate metabolic process. Is an ortholog of C. elegans pyc-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23262.1 CBG23262.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23262 CBG23262   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00027104
WBVar00132936
WBVar00132937
WBVar00027109
WBVar00132940
WBVar00132941
WBVar00132938
WBVar00132939
WBVar00132944
WBVar00132945
WBVar00132942
WBVar00132943
WBVar00132946

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pyc-1, ATGAAAATGGAGATGGTAATCGACTCGCCAATTGCTGGAACAGTCAAGGCTATCCATGCT, WBGene00041648   Expr1060658 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region