WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00034237 Gene Name  Cbr-sra-35
Sequence Name  ? CBG13478 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable G protein-coupled receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is an ortholog of C. elegans sra-35. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG13478.1 CBG13478.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG13478 CBG13478   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00119908
WBVar00119909
WBVar00119910
WBVar00119911
WBVar00119925
WBVar00119923
WBVar00119924
WBVar00119918
WBVar00119919
WBVar00119916
WBVar00119917
WBVar00119914
WBVar00119915
WBVar00119912
WBVar00119913
WBVar00119921
WBVar00119922
WBVar00119920

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sra-35, AAGGAGACAATGGATGCAAGAATGGCGCAATTGAGAAATTCATGGGACGCTCAGGCTCCG, WBGene00034237   Expr1067068 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region