WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041724 Gene Name  Cbr-pkc-1
Sequence Name  ? CBG23354 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and diacylglycerol-dependent serine/threonine kinase activity. Is an ortholog of C. elegans pkc-1. In C. elegans, pkc-1 is involved in several processes, including nervous system process; regulation of presynaptic dense core granule exocytosis; and signaling. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23354a.1 CBG23354a.1   [unknown]
Transcript:CBG23354b.1 CBG23354b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23354b CBG23354b   [unknown]
CDS:CBG23354a CBG23354a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-pkc-1, GAATGCTAGCAAACGATTAGGATGTGTTGTCTCGCAAGGAGGTGAAGATGCTATTCGTGC, WBGene00041724   Expr1056468 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region