WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041812 Gene Name  Cbr-twk-13
Sequence Name  ? CBG23453 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans twk-13. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23453a.1 CBG23453a.1   [unknown]
Transcript:CBG23453b.1 CBG23453b.1   [unknown]
Transcript:CBG23453c.1 CBG23453c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23453b CBG23453b   [unknown]
CDS:CBG23453a CBG23453a   [unknown]
CDS:CBG23453c CBG23453c   [unknown]

0 RNAi Result

4 Allele

Public Name
WBVar00133054
WBVar00133055
WBVar00000769
WBVar00133053

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG27033, AAACAATTTGTGGCAGTACCAGCAACCAGTCGGAGCGGCACGATGAAGCAACCACTCATC, WBGene00088447   Expr1068496 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-twk-13, GCTGAACAACTGACGAAACTGTCACAACTGCCAGAAGAATATCTGCTCGATTGTCTGATA, WBGene00041812   Expr1066281 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region