WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041825 Gene Name  Cbr-twk-14
Sequence Name  ? CBG23471 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans twk-14. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23471a.1 CBG23471a.1   [unknown]
Transcript:CBG23471b.1 CBG23471b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23471b CBG23471b   [unknown]
CDS:CBG23471a CBG23471a   [unknown]

0 RNAi Result

11 Allele

Public Name
WBVar00027309
WBVar00133060
WBVar00133061
WBVar00133059
WBVar00133064
WBVar00133065
WBVar00133062
WBVar00133063
WBVar00027304
WBVar00133066
WBVar00133067

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-twk-14, TGTGGAGAATGAGGAACAGAAGATCTCAGCAACACGAGTAGGACCAATGGGAATTCTTGA, WBGene00041825   Expr1069606 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region