WormMine: Gene WBGene00042014

• WormBase Gene ID: WBGene00042014
• Gene Name: Cbr-hcp-6
• Sequence Name: CBG23744
• Organism: Caenorhabditis briggsae
• Automated Description: Predicted to be involved in mitotic chromosome condensation. Predicted to be part of condensin complex. Is an ortholog of C. elegans hcp-6. In C. elegans, hcp-6 is involved in attachment of mitotic spindle microtubules to kinetochore; embryo development; and mitotic chromosome condensation.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG23744.1	CBG23744.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG23744	CBG23744		[unknown]

0 RNAi Result

1 Allele

• WBVar00015239

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in Cbr-htz-1(gu167) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-htz-1(gu167)_upregulated
	Transcripts that showed significantly increased expression in Cbr-spr-4(gu163) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-spr-4(gu163)_upregulated

1 Expression Patterns

• Primary Identifier: Expr1050437
• Remark: Cbr-hcp-6, GCTAGACACTATTGAAGGCATCCGAAACCATCGGAACTATATCATGACCGCTTTGAAAGG, WBGene00042014
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

2 GO Annotation

0 Homologues

0 Locations

2 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region