WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042069 Gene Name  CBG23809
Sequence Name  ? CBG23809 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in intrinsic apoptotic signaling pathway. Is an ortholog of C. elegans Y39B6A.34. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23809.1 CBG23809.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23809 CBG23809   [unknown]

0 RNAi Result

33 Allele

Public Name
WBVar00133384
WBVar00133385
WBVar00133388
WBVar00133389
WBVar00133386
WBVar00133387
WBVar00133392
WBVar00053259
WBVar00133393
WBVar00133390
WBVar00133391
WBVar00140116
WBVar00133396
WBVar00140117
WBVar00133397
WBVar00133394
WBVar00053264
WBVar00133395
WBVar00140120
WBVar00140121
WBVar00140118
WBVar00140119
WBVar00053269
WBVar00140124
WBVar00140125
WBVar00140122
WBVar00140123
WBVar00053274
WBVar00140126
WBVar00053279

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG23809, AAACCTGCAGCTCATTTGGCCGGCACTCAAAGTCAACGTCGTCAGATTTTTCCGAATGGC, WBGene00042069   Expr1061060 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG23705, GGGCCGAGCACAATCAACTGTTCGATCGCCAAAAGTCGGAATTCGTCGAGAAGAAGCAGA, WBGene00041989   Expr1053505 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region