WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042147 Gene Name  CBG23910
Sequence Name  ? CBG23910 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in transcription by RNA polymerase II. Is an ortholog of C. elegans F56B3.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23910.1 CBG23910.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23910 CBG23910   [unknown]

0 RNAi Result

23 Allele

Public Name
WBVar00036667
WBVar00043389
WBVar00043359
WBVar00036672
WBVar00043394
WBVar00043364
WBVar00133581
WBVar00043399
WBVar00043369
WBVar00133584
WBVar00133585
WBVar00133582
WBVar00043404
WBVar00036652
WBVar00133583
WBVar00043374
WBVar00133586
WBVar00036657
WBVar00043409
WBVar00043379
WBVar00036662
WBVar00043414
WBVar00043384

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG23907, TATGAGCAACACTATGTACAGTATTGCTCATTGTTAGGAGCATACGTTAGTGCGATTCGC, WBGene00042145   Expr1062836 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG23910, GACAAGCCTTTGGAAAAGGGGGCGGAGCCTATTACGAAGAACGTCGAGGAGATGATGAAC, WBGene00042147   Expr1052459 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region