WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042332 Gene Name  Cbr-adr-2
Sequence Name  ? CBG24155 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity and adenosine deaminase activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans adr-2. In C. elegans, adr-2 is involved in adenosine to inosine editing; determination of adult lifespan; and positive regulation of chemotaxis. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24155.1 CBG24155.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24155 CBG24155   [unknown]

0 RNAi Result

7 Allele

Public Name
WBVar00133902
WBVar00133903
WBVar00042144
WBVar00013604
WBVar00133900
WBVar00133901
WBVar00013609

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG24154, CCAGTTGACGCTATTGTCGAAGGACCAAATTTCGAGTATTCTACTGAAACTCACGAAGAA, WBGene00042331   Expr1065452 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-adr-2, CTATGTCTTGCTCAGATAAATTATTGAGAGCCAACGTGTTAGGAGTCCAAGGAGCACTGC, WBGene00042332   Expr1050886 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region