WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00058303 Gene Name  Cre-gcy-9
Sequence Name  ? CRE07496 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process and intracellular signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans gcy-9. In C. elegans, gcy-9 is involved in several processes, including cellular response to acidic pH; detection of chemical stimulus; and positive regulation of neuronal action potential. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE07496.1 CRE07496.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE07496 CRE07496   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-gcy-9, GTGCAACTGTGTTGTTCTCAGATATTAGAGGGTTCACTCGCATTTCTTCAACTTCAACTC, WBGene00058303   Expr1116894 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region