WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00058387 Gene Name  Cre-dgn-1
Sequence Name  ? CRE07443 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable calcium ion binding activity. Predicted to be located in membrane. Predicted to be part of dystrophin-associated glycoprotein complex. Is an ortholog of C. elegans dgn-1. In C. elegans, dgn-1 is involved in anatomical structure morphogenesis; inductive cell migration; and positive regulation of locomotion. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE07443.1 CRE07443.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE07443 CRE07443   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-dgn-1, GAAAAACGGAAAGAAGAAGTCTACCAGCACCGAATACGTCTCCAAGGGACTCCCCGTTGT, WBGene00058387   Expr1093940 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  located_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region