WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00061842 Gene Name  Cre-dcr-1
Sequence Name  ? CRE24509 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable organic cyclic compound binding activity and ribonuclease III activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans dcr-1. In C. elegans, dcr-1 is involved in several processes, including nucleobase-containing compound catabolic process; olfactory learning; and regulatory ncRNA-mediated gene silencing. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE24509.1 CRE24509.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE24509 CRE24509   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-dcr-1, ATCTGCTCTCGTCAATAACACCATTTTCGCGTCGTTAGCCGTGAAATTCGAGTTCCAAAA, WBGene00061842   Expr1102285 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
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  involved_in

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  enables
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  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region