WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00068907 Gene Name  CRE24254
Sequence Name  ? CRE24254 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable ubiquitin protein ligase activity and zinc ion binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the N-end rule pathway. Is an ortholog of C. elegans ubr-1. In C. elegans, ubr-1 is involved in negative regulation of glutamate metabolic process and regulation of backward locomotion. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE24254.1 CRE24254.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE24254 CRE24254   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE24254, CGATGTGGAAGCGTGGCTGGAAGGATACGCTTGTGCGAACCATAAAAAGAAAGACGAGGA, WBGene00068907   Expr1102359 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region