WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00073281 Gene Name  CRE27938
Sequence Name  ? CRE27938 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable RNA binding activity. Predicted to be involved in box H/ACA snoRNP assembly; pseudouridine synthesis; and ribosome biogenesis. Predicted to be part of sno(s)RNA-containing ribonucleoprotein complex. Is an ortholog of C. elegans F25H8.2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE27938.1 CRE27938.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE27938 CRE27938   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE27938, CACAAACAACAGATTCAAACCCGTATGCTGAATTCGGATGTCACTCTGGATTCAACGGTC, WBGene00073281   Expr1104094 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  part_of

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region