WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00087193 Gene Name  CBG25779
Sequence Name  ? CBG25779 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG25779.1 CBG25779.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG25779 CBG25779   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00046839
WBVar00046834
WBVar00112033
WBVar00017334
WBVar00017329
WBVar00017324
WBVar00017319
WBVar00017314
WBVar00017304
WBVar00017309
WBVar00017294
WBVar00017299
WBVar00017289

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG25779, GAACGCAAACCCATGGATCCATCCCTAGACCCAAAGTTTCGTGTAGTGATAAAGAACCTT, WBGene00087193   Expr1051232 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region