WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119330 Gene Name  Cjp-pks-1
Sequence Name  ? CJA00126 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable acyltransferase activity and phosphopantetheine binding activity. Predicted to be involved in biosynthetic process. Is an ortholog of C. elegans pks-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00126.1 CJA00126.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00126 CJA00126   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA00126, ACCTAAGCATCAAAGGATTGTCGTTAGCCAGAGGATATCTCGGTTCCGAAAATCCGACAA, WBGene00119330   Expr1088519 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22303, ATTCTCTTCGACTCCTGGGTGCTAAGAACGAATGAGTTAGATGTTGAAAATATCAGACAG, WBGene00177875   Expr1081710 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22873, GTCGATTCACGCTCTGAGCCATCTCCGTTCCGCACAGCAAATATTGTACTTAATGAAATT, WBGene00178445   Expr1091341 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region