WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119405 Gene Name  Cjp-clh-2
Sequence Name  ? CJA00201 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable voltage-gated chloride channel activity. Predicted to be involved in chloride transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans clh-2. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00201c.1 CJA00201c.1   [unknown]
Transcript:CJA00201b.1 CJA00201b.1   [unknown]
Transcript:CJA00201a.1 CJA00201a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00201a CJA00201a   [unknown]
CDS:CJA00201b CJA00201b   [unknown]
CDS:CJA00201c CJA00201c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-clh-2, CAAGGATATGACTTATCGGGAAATGAAGGAGATTTTGCAACTCGCACCACATCTGAGATC, WBGene00119405   Expr1079637 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region