WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119498 Gene Name  Cjp-lin-17
Sequence Name  ? CJA00295 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable Wnt receptor activity. Predicted to be involved in Wnt signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans lin-17. In C. elegans, lin-17 is involved in several processes, including axis specification; cell differentiation; and sex differentiation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00295.1 CJA00295.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00295 CJA00295   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA28416, ATAAAATCGTTCATCGAACAGGCGGAAGATCAGCTCCGAGAGCAGAAAACTGACCTCTTG, WBGene00183990   Expr1085740 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-lin-17, GCCAGTCTACATGCAAATGGCCACCAATCCGTCGCAAAACGTGTGGCGACCGAGCAAAGT, WBGene00119498   Expr1087336 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA19744, CCCTACCGTACCTCTCACCACTGCTCCTCGACGCTCCGATCCGTTCCTGCCATGCTCTGG, WBGene00175315   Expr1080504 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region