WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120106 Gene Name  CJA00902
Sequence Name  ? CJA00902 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable metalloendopeptidase activity. Predicted to be involved in cell adhesion and proteolysis. Predicted to be located in membrane. Is an ortholog of C. elegans Y43F4A.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00902a.1 CJA00902a.1   [unknown]
Transcript:CJA00902b.1 CJA00902b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00902a CJA00902a   [unknown]
CDS:CJA00902b CJA00902b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA00902, TTTGTCCAAAATGCGAAGACTACTGTGGCGAAAATTGTGGTCCACCAATCACAATACCCG, WBGene00120106   Expr1076098 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region