WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120136 Gene Name  Cjp-daf-1
Sequence Name  ? CJA00932 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and transmembrane receptor protein serine/threonine kinase activity. Predicted to be involved in cell surface receptor protein serine/threonine kinase signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans daf-1. In C. elegans, daf-1 is involved in several processes, including dauer entry; determination of adult lifespan; and response to bacterium. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00932.1 CJA00932.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00932 CJA00932   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA08983, ATCGTCTTTATTATCATCAGCTAGTGCTTTGATAAGTCCATCTCGTGAAAATGCATCGCG, WBGene00128187   Expr1072895 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-daf-1, CAGTGCAGTCGCAGGCACGAAATGTTCGCGGAAACCGCAAATTGCTCACCGAGATATCAA, WBGene00120136   Expr1073989 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA12234, TCGGAGGAACGCGTGCACCGATTCATCAATGAAAAGCTCATTCCGGCGCTGAAACAATAT, WBGene00131438   Expr1090809 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  located_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region