WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120284 Gene Name  Cjp-lgx-1.1
Sequence Name  ? CJA01080 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans lgx-1. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01080.2 CJA01080.2   [unknown]
Transcript:CJA01080.1 CJA01080.1   [unknown]
Transcript:CJA01080.4 CJA01080.4   [unknown]
Transcript:CJA01080.3 CJA01080.3   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01080 CJA01080   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA03896, GTGAGACTTGTCAAGGAGGATCGAATTGTGATATGGACACTGGAATCTGCATGTGCCCAC, WBGene00123100   Expr1084103 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA27497, ACAGCACGAAGGAAAATGTGTGCTCCGTCAGCAACAGAAGGTTGTCGGTGAGTTGGATAA, WBGene00183069   Expr1086860 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-lgx-1, ACTTGCAGCATGAAAGAAAATTGTACTGGAGGAGCCACCTGTTTTGAAGGAATGTGCGCC, WBGene00120284   Expr1077755 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region