WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120460 Gene Name  CJA01256
Sequence Name  ? CJA01256 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of C. elegans T27F6.1; T09E11.9; and T09E11.6. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01256a.1 CJA01256a.1   [unknown]
Transcript:CJA01256c.1 CJA01256c.1   [unknown]
Transcript:CJA01256b.1 CJA01256b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01256c CJA01256c   [unknown]
CDS:CJA01256b CJA01256b   [unknown]
CDS:CJA01256a CJA01256a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA01256, CGCCGAGTTGCTGTATAATCGAACGTTTTTGGGTCAAGAAGATCATAAATTGGAGGAGGA, WBGene00120460   Expr1082587 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  located_in
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region