WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120885 Gene Name  CJA01681
Sequence Name  ? CJA01681 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable guanylate cyclase activity and heme binding activity. Predicted to be involved in cGMP biosynthetic process. Is an ortholog of C. elegans gcy-35. In C. elegans, gcy-35 is involved in aerotaxis; cGMP-mediated signaling; and response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01681a.1 CJA01681a.1   [unknown]
Transcript:CJA01681c.1 CJA01681c.1   [unknown]
Transcript:CJA01681b.1 CJA01681b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01681a CJA01681a   [unknown]
CDS:CJA01681b CJA01681b   [unknown]
CDS:CJA01681c CJA01681c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-gcy-35, GATTTGCTCGAATTGGTTCATCCAGAAGTTCCATTTTCATACGAGTCTATTCGATATTAT, WBGene00120885   Expr1072113 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region