WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00122161 Gene Name  CJA02957
Sequence Name  ? CJA02957 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans nol-9 and pik-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA02957b.1 CJA02957b.1   [unknown]
Transcript:CJA02957a.1 CJA02957a.1   [unknown]
Transcript:CJA02957c.1 CJA02957c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA02957c CJA02957c   [unknown]
CDS:CJA02957a CJA02957a   [unknown]
CDS:CJA02957b CJA02957b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-nol-9, AAACCTCGAAAGTTGTGTGGAAAAGAGGATATGCCGTCTCTCTGTGTGATTGATGGAAAT, WBGene00122161   Expr1085170 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22604, AATTGTTATTGAGAGTGTGGTGTGCGAAAGGATACACGACCAATCACTTGTATCAGCTTT, WBGene00178176   Expr1090212 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region