WormMine: Gene WBGene00122234

• WormBase Gene ID: WBGene00122234
• Gene Name: Cjp-smg-3
• Sequence Name: CJA03030
• Organism: Caenorhabditis japonica
• Automated Description: Predicted to enable RNA binding activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Is an ortholog of C. elegans smg-3. In C. elegans, smg-3 is involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis japonica
• Taxon Id: 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CJA03030.1	CJA03030.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CJA03030	CJA03030		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

• Primary Identifier: Expr1087675
• Remark: Cjp-smg-3, CCAAAAGATTTGTACAAGGATTCCGAACAGAGAACTCTGGACAAGGCGGCGATGGCTGAA, WBGene00122234
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1073653
• Remark: CJA23153, TCACATTGTCCTGGATATTAACGAAAAAACGGTGGACGTGTTTTTAAAGTGTCTACGACG, WBGene00178725
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

2 GO Annotation

0 Homologues

0 Locations

2 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

• Name: gene

0 Strains

0 Upstream Intergenic Region