WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124307 Gene Name  Cjp-ser-1
Sequence Name  ? CJA05103 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans ser-1. In C. elegans, ser-1 is involved in several processes, including reproductive behavior; response to heat; and signal transduction. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05103a.1 CJA05103a.1   [unknown]
Transcript:CJA05103c.1 CJA05103c.1   [unknown]
Transcript:CJA05103b.1 CJA05103b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05103c CJA05103c   [unknown]
CDS:CJA05103a CJA05103a   [unknown]
CDS:CJA05103b CJA05103b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ser-1, TTCAGCTGGTGCTGCAAATGGAACTGCAAATGGTTCTGCCAAACGTCATTTGACACTTTT, WBGene00124307   Expr1074187 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region