WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00125466 Gene Name  Cjp-pgs-1
Sequence Name  ? CJA06262 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cardiolipin biosynthetic process and translation. Predicted to be located in ribosome. Is an ortholog of C. elegans pgs-1. In C. elegans, pgs-1 is involved in regulation of cell population proliferation and regulation of mitochondrial membrane potential. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA06262b.1 CJA06262b.1   [unknown]
Transcript:CJA06262a.1 CJA06262a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA06262a CJA06262a   [unknown]
CDS:CJA06262b CJA06262b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA01837, CAAACGCACTTTTTCAAAGCGCTCGAAGAGGAGGGACTTTCGCTCGCGGAGCCACGCCAC, WBGene00121041   Expr1076241 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA06262, GTGATAACGTCGGATAACGAGCTCGTCACGCGGCTAAACCAAGAGAAGAATCGACTATTC, WBGene00125466   Expr1081921 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  located_in
  enables

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region