WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00126246 Gene Name  Cjp-rict-1.2
Sequence Name  ? CJA07042 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in TOR signaling. Predicted to be part of TORC2 complex. Is an ortholog of C. elegans rict-1. In C. elegans, rict-1 is involved in mesendoderm development. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA07042.1 CJA07042.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07042 CJA07042   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA07042, AGAACAGGACATGCGCGCAGTGGTGTTCACATACAACCACATTCCACTTATAGATGCTTT, WBGene00126246   Expr1075832 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA19832, ACTTGACGAGTATCGCTTTAAACCTCACTCGAGAGCTTTTCTTCAACAAATTTTCTACGA, WBGene00175403   Expr1088159 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  part_of
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region