WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00126347 Gene Name  Cjp-riok-2
Sequence Name  ? CJA07143 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Is an ortholog of C. elegans riok-2. In C. elegans, riok-2 is involved in nematode larval development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA07143.1 CJA07143.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07143 CJA07143   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA19614, AATTCACAGAGGAGGCGTGGCTAGAACGCTCAACGATTTGTGCAAACATCAGTTGGTGGC, WBGene00175185   Expr1089644 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07143, CAGAAAGAAGAAGATTGGCGTGACGTCTGGAACCAGAAGCGTAGCTACCAGTGTGGCAAC, WBGene00126347   Expr1081680 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region