WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00126578 Gene Name  Cjp-gbh-1
Sequence Name  ? CJA07374 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable iron ion binding activity and oxidoreductase activity. Predicted to be involved in carnitine biosynthetic process. Is an ortholog of C. elegans gbh-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA07374a.1 CJA07374a.1   [unknown]
Transcript:CJA07374b.1 CJA07374b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07374a CJA07374a   [unknown]
CDS:CJA07374b CJA07374b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-eel-1, GATCGCCAACATTGTCAAGCATATTGTGGTGGGTTTTTGTTTTTGTATTTTCGGATACAA, WBGene00126432   Expr1073306 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07374, CGATGGAATCGCCGTTTTGAAAGGAGCTGAGAAGGGAAAGAAGGGAGCAGTGGAAGCGAT, WBGene00126578   Expr1074503 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA02221, GGGACATTGTCAAATCACGGGTTCGTCATCTTCGTGACAAACTTTCTCTGGAACAGAATC, WBGene00121425   Expr1078334 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region