WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00126663 Gene Name  Cjp-mec-1
Sequence Name  ? CJA07459 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable calcium ion binding activity and serine-type endopeptidase inhibitor activity. Is an ortholog of C. elegans mec-1. In C. elegans, mec-1 is involved in detection of mechanical stimulus involved in sensory perception of touch; extracellular structure organization; and mechanosensory behavior. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA07459a.1 CJA07459a.1   [unknown]
Transcript:CJA07459b.1 CJA07459b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07459a CJA07459a   [unknown]
CDS:CJA07459b CJA07459b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA22386, AATGGGAAGCAGGAGATTAAGTGGGTTTGTCGGGCTATTAGCCATCAAATTGGGCAGGTA, WBGene00177958   Expr1077693 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region