WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127226 Gene Name  Cjp-ints-8
Sequence Name  ? CJA08022 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in snRNA 3'-end processing. Is an ortholog of C. elegans ints-8. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08022.1 CJA08022.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08022 CJA08022   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA08022, CGCGAATGTCAGAGTATCAGAAGGCGATGCAAATGCTGAGGAACAACGAGACGAGAGATG, WBGene00127226   Expr1087277 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA24837, GAGCAGACGGCTGTGAGCGACGACAGAGAGACATCTGAAATTGTATGTTTTCGACCGTAA, WBGene00180409   Expr1074870 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA11707, ATGACAATTCAGAGTTGCGGAAGAGTGAATTGTATCGGTATAGAGGAGCTGTGGAAACGT, WBGene00130911   Expr1076468 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region