WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127344 Gene Name  Cjp-pycr-4
Sequence Name  ? CJA08140 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable pyrroline-5-carboxylate reductase activity. Predicted to be involved in proline biosynthetic process. Is an ortholog of C. elegans pycr-4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08140.1 CJA08140.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08140 CJA08140   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA18918, ATCGCACAAACCGTTTATTACGTTGGATTGGCGGAAAAGTTGCTCGGTTTGGAGAAAGGC, WBGene00138121   Expr1072420 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA08140, GGAGAAAAACGGTTTCCGATCCGCTGTCATTGAGGCGGTTGTGGCGGCTTCACAGAAAGC, WBGene00127344   Expr1071293 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region