WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127671 Gene Name  Cjp-ctbp-1
Sequence Name  ? CJA08467 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable NAD binding activity and oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Is an ortholog of C. elegans ctbp-1. In C. elegans, ctbp-1 is involved in negative regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08467c.1 CJA08467c.1   [unknown]
Transcript:CJA08467a.1 CJA08467a.1   [unknown]
Transcript:CJA08467b.1 CJA08467b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08467a CJA08467a   [unknown]
CDS:CJA08467b CJA08467b   [unknown]
CDS:CJA08467c CJA08467c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ctbp-1, TATTAACGGTAGATGCCCTCAAGATTTAACCCATTGCATCAATAAAGAAGCAGTTATGCG, WBGene00127671   Expr1071739 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region