WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128107 Gene Name  Cjp-cdd-2
Sequence Name  ? CJA08902 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable cytidine deaminase activity and zinc ion binding activity. Predicted to be involved in cytidine deamination. Is an ortholog of C. elegans cdd-2. In C. elegans, cdd-2 is involved in RNA modification; embryo development; and pyrimidine nucleoside metabolic process. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08902.1 CJA08902.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08902 CJA08902   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-cdd-2, TTGAACTTCTTCCTTACGCTTTCACTCCCGAATCGCTCGATACATTCGAGCAAGAAAAAG, WBGene00128107   Expr1088361 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region