WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128609 Gene Name  Cjp-ect-2
Sequence Name  ? CJA09404 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable GTPase activator activity and guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of cytokinesis, actomyosin contractile ring assembly. Predicted to be located in cytoplasm and nucleus. Is an ortholog of C. elegans ect-2. In C. elegans, ect-2 is involved in several processes, including asymmetric protein localization involved in cell fate determination; mitotic cytokinesis; and regulation of actin filament-based process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09404.1 CJA09404.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09404 CJA09404   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA20140, TTGCAAGTCTTCACTCGAGGCAGCGAAGACCGTACAAGTATATTGATCAGATACAGTTGA, WBGene00175711   Expr1088272 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-ect-2, AGTAATCCAGAGTTTCATCGCCTCAAACTTACGGATTTGATGGTGAAACCAGTTCAACGC, WBGene00128609   Expr1073544 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  located_in
  located_in
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  located_in
  located_in
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region