WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128950 Gene Name  CJA09746
Sequence Name  ? CJA09746 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA binding activity and G protein-coupled receptor activity. Predicted to be involved in DNA integration; DNA transposition; and G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans ZK1307.7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09746a.1 CJA09746a.1   [unknown]
Transcript:CJA09746b.1 CJA09746b.1   [unknown]
Transcript:CJA09746c.1 CJA09746c.1   [unknown]
Transcript:CJA09746d.1 CJA09746d.1   [unknown]
Transcript:CJA09746e.1 CJA09746e.1   [unknown]
 

Other

5 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09746d CJA09746d   [unknown]
CDS:CJA09746e CJA09746e   [unknown]
CDS:CJA09746b CJA09746b   [unknown]
CDS:CJA09746c CJA09746c   [unknown]
CDS:CJA09746a CJA09746a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA04551, GACAAAGAGTCGTTGCTCTCCGAGAACATTCGCCCGCTGTACACCCTGTCATCGGATCTT, WBGene00123753   Expr1077122 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region