WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130097 Gene Name  Cjp-erd-2.1
Sequence Name  ? CJA10893 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ER retention sequence binding activity. Predicted to be involved in protein retention in ER lumen. Predicted to be located in membrane. Is an ortholog of C. elegans erd-2.1. In C. elegans, erd-2.1 is involved in IRE1-mediated unfolded protein response. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA10893.1 CJA10893.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA10893 CJA10893   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-erd-2, GCACCGGAAACGCCGAAACCATCACTGCTCACTATCTGTTCGCCCTTGGTTCCTACAGAT, WBGene00130097   Expr1082410 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region