WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130550 Gene Name  Cjp-ift-81
Sequence Name  ? CJA11346 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable tubulin binding activity. Predicted to be involved in cilium assembly and intraciliary transport. Predicted to be part of intraciliary transport particle B. Is an ortholog of C. elegans ift-81. In C. elegans, ift-81 is involved in chemotaxis; detection of stimulus involved in sensory perception; and intraciliary transport. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11346.1 CJA11346.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11346 CJA11346   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ift-81, ATAGTAGAAGTTCTGAATGTTCCACAGAAATTCGATCGTCCAAAAACCGCTGCTCCACAA, WBGene00130550   Expr1078117 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  part_of
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region