WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00121851 Gene Name  Cjp-pcs-1
Sequence Name  ? CJA02647 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable glutathione gamma-glutamylcysteinyltransferase activity and metal ion binding activity. Predicted to be involved in phytochelatin biosynthetic process and response to metal ion. Is an ortholog of C. elegans pcs-1. In C. elegans, pcs-1 is involved in detoxification of inorganic compound and phytochelatin biosynthetic process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA02647.1 CJA02647.1   [unknown]
Transcript:CJA02647.2 CJA02647.2   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA02647 CJA02647   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-pcs-1, CGTTCGAGCACGGATTTAGTGAACGTAGCGATCGAATTGGAAATTTGGCTAGCGAGTATA, WBGene00121851   Expr1076136 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region