WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00131549 Gene Name  Cjp-coq-2
Sequence Name  ? CJA12345 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable transferase activity, transferring alkyl or aryl (other than methyl) groups. Predicted to be located in membrane. Is an ortholog of C. elegans coq-2. In C. elegans, coq-2 is involved in ubiquinone biosynthetic process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA12345a.1 CJA12345a.1   [unknown]
Transcript:CJA12345b.1 CJA12345b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA12345a CJA12345a   [unknown]
CDS:CJA12345b CJA12345b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-coq-2, TCAATATTGATAATGGAACGGATTGTTGGAACAAGTTCAAGTCGAATTCGTGGATGGGCG, WBGene00131549   Expr1084673 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region